Mechanism Discovery
Uncover the mechanism behind your signature with topology-aware impact analysis: perturbed pathways and the upstream regulators driving them.
Use Cases
What do you want to do today?
Tissue Structure
Map your spatial architecture of a tissue, identifying distinct regions and how their cell types and pathways differ.
Trajectory Inference
Order cells along developmental or regenerative trajectories, using pseudotime to trace how states emerge, diverge, and transition.
Biomarker Identification
Identify the biomarkers in your data that indicate a specific biological state, process, or treatment response.
Subtype Discovery
Discover subgroups within your population from their molecular profiles to stratify samples and guide decisions.
Network Analysis
Build interaction networks to identify hub genes, key drivers, upstream regulators, and predicted downstream effects.
Drug Repurposing
Match your disease gene signature to drugs known to reverse it, or to drugs that produce a similar molecular effect.
Cell-Cell Communication
Infer how your cell populations signal to one another, identifying the ligand-receptor interactions in your dataset.
Cell Type Identification
Annotate single cells in your sample, automatically or manually (by cluster), to define which cell populations are present.