Order cells along developmental or regenerative trajectories, using pseudotime to trace how states emerge, diverge, and transition.
Uncover the mechanism behind your signature with topology-aware impact analysis: perturbed pathways and the upstream regulators driving them.
Infer how your cell populations signal to one another, identifying the ligand-receptor interactions in your dataset.
Discover subgroups within your population from their molecular profiles to stratify samples and guide decisions.
Map your spatial architecture of a tissue, identifying distinct regions and how their cell types and pathways differ.
Build interaction networks to identify hub genes, key drivers, upstream regulators, and predicted downstream effects.